MERFISH Data and Protocols
Additional Data and Resources
Experimentis a unique index assigned to independent experiments on different days.
Codebookspecifies the version of the two shuffled 16-bit MHD4 codebook used.
Cell_IDrepresents a unique index assigned to each imaged cell in each experiment.
intCodewordis an integer representation of the binary barcode observed for that RNA.
Gene_Nameis the name of the assigned gene.
Exact_Matchis 1 only if the word is an exact match to an RNA code word.
Corrected_Matchis 1 only if the word is a corrected match with one-bit error originally.
Cell_Position_Yrepresent the position of the cell within the sample measured in microns.
RNA_Position_Yrepresent the centroid position of the each RNA spot measured in nanometers.